Pro jects
Visual pipelines, node by node
A drag-and-drop canvas where every node wraps a real bioinformatics tool. Runs locally, on HPC, or on cloud. Exports to Nextflow, Snakemake, CWL and Galaxy.
Every step visible. Wire tools together, see types and environments at each node, catch mismatches before you run.
Describe the analysis and watch the graph assemble. It builds, validates, runs and fixes workflows, and reads the logs when something breaks.
Paste a paper's DOI. BioNodulo reads the methods section and suggests a pre-wired workflow that matches it.
Edit the same canvas with your team in real time, or drive the whole editor from Claude, Codex or ChatGPT over MCP.
Between degrees I work as an AI evaluator, reading what coding agents produce and marking where they go wrong. It's the same job as the PhD, done by hand: catching plausible-but-wrong output.