Perth, Western Australia Bioinformatics since 2020

Mika Martin

Bioinformatics researcher. I write software that catches the errors pipelines don't report.

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Fig. 01 — The short version MM/26

Every program has a solution. The trouble is, pipelines can hand you a wrong answer with a straight face. My work is making them fail loudly instead.

0/7
Masters GPA, with distinction
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Typed tool nodes in BioNodulo
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Paper in Trends in Genetics
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Karate, international ranking
Fig. 02 — Two halves Pick one
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In silico

Research

The PhD, the paper, and the platform I'm building to make pipelines honest.

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In person

About

Karate, comics, five languages, and a dog who has never read my code.
Fig. 03 — On record
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Perth, 2026

Simplifying bioinformatics without losing any of the science.

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UWA, 2024
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First pipeline, 2021

Every program has a solution. Leave it to me.

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Biocodecs lab, 2026
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Surabaya, 2016
Fig. 04 — The kit Hover to inspect
Python
Pythondaily driver
R
Rstats
SQL
SQLdata
Linux
Linuxhome turf
Git
Gitalways
Snakemake
Snakemakeworkflows
Nextflow
Nextflowworkflows
Docker
Dockercontainers
HPC
HPC / Slurmcompute
MCP
MCPagents
FastAPI
FastAPIbackend
React
Reactfrontend
LoRA
LoRA trainingoff hours
VBA
VBAold faithful
Claude Code
Claude CodeI grade its homework
Tauri
Tauridesktop
Fig. 05 — The main project bionodulo.com

Bio
Nodulo

A visual canvas for building and running bioinformatics workflows. Drag nodes onto a graph, wire them up, run it on your laptop, a cluster, or the cloud.

It started as my proof of concept. The PhD exists because of what building it exposed.

See the project ↗ bionodulo.com ↗
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943 nodes, 51 categories closed alpha
Fig. 06 — Affiliations
UWA ACRTC Biocodecs Trends in Genetics Alignerr Mercor UWA AI Club